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Fix: update rpy2 version - #433

Merged

mumichae merged 17 commits into

mainfrom

Apr 27, 2026

Merged

Fix: update rpy2 version#433
mumichae merged 17 commits into
mainfrom
fix_rpy2

Commits on Apr 24, 2026
- fix: update rpy2 version and anndata2ri syntax
  mumichae
  committed
  a138aa9
- Merge branch 'main' into fix_rpy2
  mumichae
  authored
  f2d8504
- update python and R versions to work with updated rpy2 and anndata2ri versions
  mumichae
  committed
  88d136a
- Merge branch 'fix_rpy2' of https://github.com/theislab/scib into fix_rpy2
  mumichae
  committed
  9d582a0
- include setuptools
  mumichae
  committed
  397e852
- fix: set latest R version to "release"
  mumichae
  committed
  e79b83d
- fix lowest tested R version to 4.4
  mumichae
  committed
  b94ede8
- Merge branch 'main' into fix_rpy2
  mumichae
  authored
  82ab4c6
Commits on Apr 27, 2026
- test: add R version specific rpy2 dependencies
  mumichae
  committed
  5c38377
- Merge branch 'fix_rpy2' of https://github.com/theislab/scib into fix_rpy2
  mumichae
  committed
  4e0b920
- fix: np.isin instead of np.in1d
  mumichae
  committed
  597f73a
- refactor: wrap rpy2 activation
  mumichae
  committed
  4eed54a
- use igraph implementation for louvain
  mumichae
  committed
  fb11b8d
- relax assertions for louvain and test only igraph implementation
  mumichae
  committed
  acc0670
- add qc tests
  mumichae
  committed
  7753854
- add workflow for preprocessing tests
  mumichae
  committed
  240f8bb
- switch to smaller zebrafish datasets and fix tests
  mumichae
  committed
  2c3bb19