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@popellab

Popel Systems Biology Laboratory

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  1. qspio qspio Public

    MATLAB SimBiology-Based Platform for QSP Immune Oncology Models

    MATLAB 12 3

  2. QSPIO-TNBC QSPIO-TNBC Public

    Forked from HanwenWang95/QSPIO-TNBC

    This repository contains the latest QSP platform for TNBC/NSCLC developed by the Popel Systems Biology Laboratory

    MATLAB 8 2

  3. maple maple Public

    Schema-validated LLM extraction of QSP calibration targets from literature, via interactive MCP or batch script.

    Python

Repositories

Showing 10 of 22 repositories
  • qsp-hpc-tools Public

    SLURM-aware orchestration and three-tier caching for QSP simulation campaigns.

    popellab/qsp-hpc-tools's past year of commit activity
    Python 0 MIT 0 9 0 Updated Sep 5, 2026
  • maple Public

    Schema-validated LLM extraction of QSP calibration targets from literature, via interactive MCP or batch script.

    popellab/maple's past year of commit activity
    Python 0 MIT 0 2 2 Updated Aug 26, 2026
  • qsp-inference Public

    Two-stage Bayesian calibration for QSP models: literature-prior MCMC then neural posterior estimation.

    popellab/qsp-inference's past year of commit activity
    Python 0 0 5 0 Updated Aug 13, 2026
  • qsp-codegen Public

    SBML → C++ CVODE code generator for QSP models.

    popellab/qsp-codegen's past year of commit activity
    Python 0 MIT 2 3 0 Updated Aug 4, 2026
  • qsp-model-explorer Public
    popellab/qsp-model-explorer's past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jul 15, 2026
  • SPQSP_PDAC Public
    popellab/SPQSP_PDAC's past year of commit activity
    Cuda 0 1 1 1 Updated Jun 29, 2026
  • maple-paper Public
    popellab/maple-paper's past year of commit activity
    TeX 0 0 0 0 Updated Jun 1, 2026
  • SPQSP_HCC_GPU Public Forked from popellab/SPQSP_PDAC

    GPU based version of of the SPQSP_HCC-main code base.

    popellab/SPQSP_HCC_GPU's past year of commit activity
    Cuda 0 1 0 0 Updated Apr 20, 2026
  • QSP-mets Public Forked from theinmozhiarulraj/QSP-mets
    popellab/QSP-mets's past year of commit activity
    MATLAB 0 MIT 2 0 0 Updated Oct 16, 2024
  • combinatorial_biomarker_testing Public Forked from theinmozhiarulraj/combinatorial_biomarker_testing
    popellab/combinatorial_biomarker_testing's past year of commit activity
    R 2 MIT 1 0 0 Updated Oct 11, 2024
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