Issues

• [Q]Regarding the value in the top-left corner

  open2c/coolpuppy#168 · Filter by author oganesson123 opened on Mar 26, 2026
  1

• [BUG]error running plotpup.py

  open2c/coolpuppy#166 · Filter by author wangmhan opened on Apr 10, 2025

• [Q]can plotpup.py show log2FC

  open2c/coolpuppy#165 · Filter by author BenxiaHu opened on Mar 16, 2025
  6

• Dividing pileups with multiple categories

  open2c/coolpuppy#163 · Filter by author rikrdo89 opened on Mar 4, 2025
  1

• Values <1 for rescale_flank cause assertion error when including central pixel score

  open2c/coolpuppy#161 · Filter by author rikrdo89 opened on Mar 2, 2025

• [Q] Centromere Trans Pileup

  open2c/coolpuppy#157 · Filter by author LucasMcNU opened on Oct 29, 2024
  2

• [Q] How to test significance of change between pileups?

  open2c/coolpuppy#148 · Filter by author AudreyBaguette opened on Jun 3, 2024
  1

• pu.pileupsWithControl might skip some pile-up regions or raise vague domain_score not in dict2 AssertionError

  open2c/coolpuppy#146 · Filter by author nvaulin opened on May 25, 2024
  1

• To access a value by position, use ser.iloc[pos] chroffset = self.clr.offset(region[0])

  open2c/coolpuppy#144 · Filter by author jiangshan529 opened on Apr 15, 2024
  4

• [Q] Question on normalization between 2 conditions before coolpups

  open2c/coolpuppy#139 · Filter by author Lucas446 opened on Dec 9, 2023

• plotpup.py TypeError: __init__() got an unexpected keyword argument 'add_all'

  open2c/coolpuppy#73 · Filter by author odovgusha opened on Jun 10, 2022
  2