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moniramehzabin/README.md

Hi, I'm Monira Mehzabin πŸ‘‹

Environmental Microbiology | Microbial Bioremediation | Bacterial Genomics | Bioinformatics

I am a microbiology researcher with interests in environmental microbiology, microbial bioremediation, bacterial genomics, and bioinformatics.

My research focuses on understanding and utilizing environmental bacteria for the remediation of pollutants. My MS research at Bangladesh Agricultural University investigated bacteria isolated from textile-effluent-impacted environments, with a focus on textile dye degradation and hexavalent chromium [Cr(VI)] tolerance and reduction.

I am also interested in connecting experimentally observed microbial functions with their genomic and metabolic potential through whole-genome sequencing and bioinformatics.

🧬 Research Interests

  • Environmental microbiology
  • Microbial bioremediation
  • Bacterial genomics and comparative genomics
  • Microbial metabolism and metabolic pathways
  • Pollutant degradation and heavy-metal remediation
  • Bioinformatics tool development

πŸ’» Research Software

A Python-based bioinformatics tool for identifying and characterizing bioremediation-associated genes in bacterial genomic data.

A Python-based tool for evaluating bioremediation pathways and their genomic evidence in bacterial genomes.

πŸ§ͺ Research & Technical Skills

Microbiology & Molecular Biology:
Microbial isolation and cultivation β€’ DNA extraction β€’ PCR β€’ 16S rRNA gene analysis β€’ microbial characterization

Genomics & Bioinformatics:
Whole-genome sequencing analysis β€’ genome assembly β€’ genome annotation β€’ functional annotation β€’ comparative genomic analysis

Computational:
Python β€’ R β€’ Git β€’ GitHub β€’ Linux/WSL β€’ statistical analysis

πŸ”­ Current Focus

I am currently working on bacterial genomics and developing computational approaches for connecting microbial genomic potential with environmentally relevant functions.

πŸ“« Connect

I am interested in research collaborations and opportunities in environmental microbiology, microbial biotechnology, bioremediation, bacterial genomics, and bioinformatics.

Pinned Loading

  1. Bioremediation-Gene-Miner Bioremediation-Gene-Miner Public

    A Python-based tool for identifying and characterizing bioremediation-associated genes in bacterial genomes.

    Python 1

  2. Bioremediation-Pathway-Tool Bioremediation-Pathway-Tool Public

    A pathway-level bioinformatics tool for conservative evidence-based detection of bioremediation capabilities from bacterial genome annotations.

    Python 1